BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F11LP1|AL425741
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1555 0.0
>3x_Contig1805
Length = 19369
Score = 1555 bits (781), Expect = 0.0
Identities = 786/791 (99%)
Strand = Plus / Minus
Query: 1 atctatcgaagttattaccattctgttgaatgcagccaattttttttgaaaaacaaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14391 atctatcgaagttattaccattctgttgaatgcagccaattttttttgaaaaacaaaagt 14332
Query: 61 tagtagtttcaactaaaagtaatagaaactttgctcgagggaaacggaaaaatggagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14331 tagtagtttcaactaaaagtaatagaaactttgctcgagggaaacggaaaaatggagaaa 14272
Query: 121 ttttctcgagggaaaaggaaaaacgtagtttctgtgaggraagtgaaaagggcaaaamaa 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 14271 ttttctcgagggaaaaggaaaaacgtagtttctgtgaggaaagtgaaaagggcaaaaaaa 14212
Query: 181 atgaaatctccccagatgtggtcacaagtaatacgggtggaaattttcctgtacgtgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14211 atgaaatctccccagatgtggtcacaagtaatacgggtggaaattttcctgtacgtgaat 14152
Query: 241 tctatagaacagccttatctcaaatgtcgctttggtttcccaaacacaaaaagtatgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14151 tctatagaacagccttatctcaaatgtcgctttggtttcccaaacacaaaaagtatgcag 14092
Query: 301 agattttccgtcttcaccatgtttttccccatatttgttttcatacatcggaagaaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14091 agattttccgtcttcaccatgtttttccccatatttgttttcatacatcggaagaaaatc 14032
Query: 361 cggggtaacaaagaatgttcacaaaagattcattgcmagtgccatttcaggcggtaaaac 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 14031 cggggtaacaaagaatgttcacaaaagattcattgcaagtgccatttcaggcggtaaaac 13972
Query: 421 ggtatgahatgttgaatcggagagagaagcaaaactggtaccccaccatttagtcaagta 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13971 ggtatgaaatgttgaatcggagagagaagcaaaactggtaccccaccatttagtcaagta 13912
Query: 481 tccatgcggatttcaatggagtacaattctcggtcagtttcttcggcaactagtgcgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13911 tccatgcggatttcaatggagtacaattctcggtcagtttcttcggcaactagtgcgaaa 13852
Query: 541 haagtaaaaacggctgtgcagggtttttctgtgttctggtccccgatttaatcacttcac 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13851 aaagtaaaaacggctgtgcagggtttttctgtgttctggtccccgatttaatcacttcac 13792
Query: 601 ctcattattctagatgtcagtacaaacaatgttcttgagcttcatgacaatatccagtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13791 ctcattattctagatgtcagtacaaacaatgttcttgagcttcatgacaatatccagtat 13732
Query: 661 gaggaaagctgtgataattcttataaatatgacattaactggcgtgggttgatcgacaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13731 gaggaaagctgtgataattcttataaatatgacattaactggcgtgggttgatcgacaac 13672
Query: 721 atagttctagcgtggcaaatgcttcataagattgataacagaaagttctttattcacttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13671 atagttctagcgtggcaaatgcttcataagattgataacagaaagttctttattcacttc 13612
Query: 781 aaacaaaacag 791
|||||||||||
Sbjct: 13611 aaacaaaacag 13601
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5935
Number of Sequences: 1807
Number of extensions: 5935
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)